Automatic Discovery of Hidden Markov Representations for Functional Sites within DNA Sequences

Tetsushi Yada [1] (yada@tokyo.jst-c.go.jp)
Yasushi Totoki [2] (totoki@idas.imslab.co.jp)
Masato Ishikawa [3] (ishikawa@trl.mei.co.jp)
Kiyoshi Asai [4] (asai@etl.go.jp)

[1] Japan Science and Technology Corporation (JST)
5-3 Yonbancho, Chiyoda-ku, Tokyo 102, Japan
[2] Information and Mathematical Science Laboratory, Inc.
2-43-1 Ikebukuro, Toshima-ku, Tokyo 171, Japan
[3] Matsushita Electric Industrial Co.,Ltd.
4-5-15 Higashi-shinagawa, Shinagawa-ku, Tokyo 140, Japan
[4] Electrotechnical Laboratory (ETL)
1-1-4 Umezono, Tsukuba 305, Japan